Publications & Works

Publication Network
Articles 32
All (32)
SCI-E, SSCI, AHCI (31)
SCI-E, SSCI, AHCI, ESCI (31)
Scopus (31)
TRDizin (1)

1. Identifying gut microbiome signatures of type 1 diabetes using machine learning and evolutionary feature selection

DALGIÇ A., YET İ.
BMC Microbiology , vol.26, no.1, 2026 (SCI-Expanded, Scopus)

2. Genetic impacts on within-pair DNA methylation variance in monozygotic twins capture gene-environment interactions and cell-type effects

Zhang X., Yet I., Villicaña S., Castillo-Fernandez J., Mangino M., Hottenga J. J., et al.
Genome biology , vol.27, no.1, 2026 (SCI-Expanded, Scopus)

3. Circadian rhythm and aryl hydrocarbon receptor crosstalk in bone marrow adipose tissue and implications in leukemia

Muratoglu B., ÖZDEMİR SAKA C., EYLEM C. C., REÇBER T., NEMUTLU E., YET İ., et al.
SCIENTIFIC REPORTS , vol.15, no.1, 2025 (SCI-Expanded, Scopus)

4. Age estimation of single nucleotide polymorphisms associated with autoinflammatory diseases in anatolia: insights from ancient and modern DNA

Karadavut D., KILINÇ G. M., YET İ.
HUMAN GENETICS , vol.145, no.1, 2025 (SCI-Expanded, Scopus)

5. Transcriptional profiling and proteomic validation revealed higher boron tolerance in Arabidopsis thaliana exposed to salt pre-treatment

KAYIHAN C., Dalli E., ÇULHA ERDAL Ş., YET İ., ÇİÇEK N., EKMEKÇİ Y.
SOUTH AFRICAN JOURNAL OF BOTANY , vol.180, pp.588-605, 2025 (SCI-Expanded, Scopus)

6. Identification of bio-markers for insulin resistance and sensitivity through multi-omics analysis

YET İ.
Acta Medica , vol.55, no.3, pp.183-188, 2024 (TRDizin)

7. A comparative urinary proteomic and metabolomic analysis between renal aa amyloidosis and membranous nephropathy with clinicopathologic correlations

ÖZBEK D. A., Koc S. C., Kucuk N. E. O., Kablan S., YET İ., ÜNER M., et al.
JOURNAL OF PROTEOMICS , vol.293, 2024 (SCI-Expanded, Scopus) Sustainable Development

8. Disruption of the circadian transcriptome through bone marrow adipose tissue-specific aryl hydrocarbon receptor (AhR) signaling in Fanconi anemia and acute myeloid leukemia patients

Muratoglu B., ÖZDEMİR SAKA C., YET İ., Uckan-Cetinkaya D.
FEBS OPEN BIO , vol.13, pp.109, 2023 (SCI-Expanded, Scopus)

9. Comparing the melissopalynological and next generation sequencing (NGS) methods for the determining of botanical origin of honey

ÖZKÖK A., AKEL BİLGİÇ H., Kosukcu C., Arık G., Canlı D., YET İ., et al.
Food Control , vol.148, 2023 (SCI-Expanded, Scopus)

10. Plasma Proteomic Analysis Reveals the Potential Role of Lectin and Alternative Complement Pathways in IgA Vasculitis Pathogenesis

Demir S., YET İ., ŞARDAN EKİZ M., Sag E., BİLGİNER Y., ÇELİKBIÇAK Ö., et al.
Diagnostics , vol.13, no.10, 2023 (SCI-Expanded, Scopus)

11. Multiomics Integration at Single-Cell Resolution Using Bayesian Networks: A Case Study in Hepatocellular Carcinoma

Jihad M., YET İ.
Omics : a journal of integrative biology , vol.27, no.1, pp.24-33, 2023 (SCI-Expanded, Scopus)

12. Somatic copy number variant load in neurons of healthy controls and Alzheimer’s disease patients

Turan Z. G., Richter V., Bochmann J., Parvizi P., Yapar E., Işıldak U., et al.
Acta Neuropathologica Communications , vol.10, no.1, 2022 (SCI-Expanded, Scopus) Creative Commons License

13. Genomic and phenotypic insights from an atlas of genetic effects on DNA methylation

Min J. L., Hemani G., Hannon E., Dekkers K. F., Castillo-Fernandez J., Luijk R., et al.
NATURE GENETICS , vol.53, no.9, pp.1311-1336, 2021 (SCI-Expanded, Scopus) Creative Commons License

14. Genome-wide association studies identify 137 genetic loci for DNA methylation biomarkers of aging

McCartney D. L., Min J. L., Richmond R. C., Lu A. T., Sobczyk M. K., Davies G., et al.
GENOME BIOLOGY , vol.22, no.1, 2021 (SCI-Expanded, Scopus) Creative Commons License

15. Inter-omics analysis in hepatocellular carcinoma

Jihad M., YET İ.
EUROPEAN JOURNAL OF HUMAN GENETICS , vol.28, no.SUPPL 1, pp.656, 2020 (SCI-Expanded, Scopus)

16. Metabolomics reveals a link between homocysteine and lipid metabolism and leukocyte telomere length: the ENGAGE consortium

van der Spek A., Broer L., Draisma H. H. M., Pool R., Albrecht E., Beekman M., et al.
SCIENTIFIC REPORTS , vol.9, 2019 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development

17. Smoking induces coordinated DNA methylation and gene expression changes in adipose tissue with consequences for metabolic health

Tsai P., Glastonbury C. A., Eliot M. N., Bollepalli S., YET İ., Castillo-Fernandez J. E., et al.
CLINICAL EPIGENETICS , vol.10, 2018 (SCI-Expanded, Scopus) Sustainable Development

18. A DNA methylation biomarker of alcohol consumption

Liu C., Marioni R. E., Hedman A. K., Pfeiffer L., Tsai P., Reynolds L. M., et al.
MOLECULAR PSYCHIATRY , no.2, pp.422-433, 2018 (SCI-Expanded, Scopus) Sustainable Development

19. GWAS of epigenetic aging rates in blood reveals a critical role for TERT

Lu A. T., Xue L., Salfati E. L., Chen B. H., Ferrucci L., Levy D., et al.
NATURE COMMUNICATIONS , vol.9, 2018 (SCI-Expanded, Scopus) Creative Commons License

20. Genetic Variation at 16q24.2 Is Associated With Small Vessel Stroke

Traylor M., Malik R., Nalls M. A., Cotlarciuc I., Radmanesh F., Thorleifsson G., et al.
ANNALS OF NEUROLOGY , vol.81, no.3, pp.383-394, 2017 (SCI-Expanded, Scopus)

21. Heritable components of the human fecal microbiome are associated with visceral fat

BEAUMONT M., Goodrich J. K., JACKSON M. A., Yet I., Davenport E. R., VİEİRA-SİLVA S., et al.
GENOME BIOLOGY , vol.17, 2016 (SCI-Expanded, Scopus) Sustainable Development

22. Genetic Influences on Metabolite Levels: A Comparison across Metabolomic Platforms

Yet I., Menni C., SHİN S., Mangino M., SORANZO N., ADAMSKİ J., et al.
PLOS ONE , vol.11, no.4, 2016 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development

23. A Metabolome-Wide Association Study of Kidney Function and Disease in the General Population

SEKULA P., GOEK O., Quaye L., Barrios C., LEVEY A. S., ROEMİSCH-MARG W., et al.
JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY , vol.27, no.4, pp.1175-1188, 2016 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development

24. Genetic and environmental impacts on DNA methylation levels in twins

Yet I., Tsai P., Castillo-Fernandez J. E., Carnero-Montoro E., Bell J. T.
EPIGENOMICS , vol.8, no.1, pp.105-117, 2016 (SCI-Expanded, Scopus)

25. Genome-wide association study identifies novel genetic variants contributing to variation in blood metabolite levels

Draisma H. H. M., Pool R., KOBL M., Jansen R., PETERSEN A., VAARHORST A. A. M., et al.
NATURE COMMUNICATIONS , vol.6, 2015 (SCI-Expanded, Scopus) Creative Commons License

26. coMET: visualisation of regional epigenome-wide association scan results and DNA co-methylation patterns

MARTİN T. C., YET İ., TSAİ P., BELL J. T.
BMC BIOINFORMATICS , vol.16, 2015 (SCI-Expanded, Scopus)

27. An integrated epigenomic analysis for type 2 diabetes susceptibility loci in monozygotic twins

Yuan W., XİA Y., Bell C. G., Yet I., Ferreira T., Ward K. J., et al.
NATURE COMMUNICATIONS , vol.5, 2014 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development

28. Long term conservation of human metabolic phenotypes and link to heritability

YOUSRİ N. A., KASTENMUELLER G., GİEGER C., SHİN S., Erte I., Menni C., et al.
METABOLOMICS , vol.10, no.5, pp.1005-1017, 2014 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development

29. An atlas of genetic influences on human blood metabolites

Shin S., Fauman E. B., Petersen A., Krumsiek J., Santos R., Huang J., et al.
NATURE GENETICS , no.6, pp.543-550, 2014 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development

30. Glycosylation of Immunoglobulin G: Role of Genetic and Epigenetic Influences

Menni C., KESER T., Mangino M., Bell J. T., Erte I., Akmacic I., et al.
PLOS ONE , vol.8, no.12, 2013 (SCI-Expanded, Scopus) Creative Commons License

31. Biomarkers for Type 2 Diabetes and Impaired Fasting Glucose Using a Nontargeted Metabolomics Approach

Menni C., FAUMAN E., Erte I., Perry J. R. B., KASTENMUELLER G., SHİN S., et al.
DIABETES , vol.62, no.12, pp.4270-4276, 2013 (SCI-Expanded, Scopus) Sustainable Development

32. Metabolomic markers reveal novel pathways of ageing and early development in human populations

Menni C., KASTENMUELLER G., PETERSEN A. K., Bell J. T., Psatha M., Tsai P., et al.
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY , vol.42, no.4, pp.1111-1119, 2013 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development
Papers Presented at Peer-Reviewed Scientific Conferences 17

1. Multiomic profiling of antibiotic response:Ampicillin, Aztreonam, Gentamicin and Cefepime’s effect on multidrug-resistant E. coli strains

TEKŞEN K., ŞARDAN EKİZ M., Özel S., POLAT C., KILINÇ G. M., ALTUNER E. M., et al.
58th Conference of the European-Society-of-Human-Genetics (ESHG), Milan, Italy, 24 May 2025, (Summary Text)

2. Evaluation of the E_ects of Ampicillin and Ceftazidime Antibiotics on Proteus mirabilis Using Metabolomic Approaches

TEKŞEN K., YET İ., ALTUNER E. M.
17th The International Symposium on Health Informatics and Bioinformatics (HIBIT 2024), İstanbul, Turkey, 18 - 20 December 2024, (Summary Text)

3. Evaluation of the E_ects of Gentamicin on Multidrug Resistant Escherichia coli Strains Using Proteomic Approaches

TEKŞEN K., ŞARDAN EKİZ M., Özel S., POLAT C., KILINÇ G. M., ALTUNER E. M., et al.
17th The International Symposium on Health Informatics and Bioinformatics (HIBIT 2024), İstanbul, Turkey, 18 - 20 December 2024, (Summary Text)

4. Evaluation of the Effects of Gentamicin on Multidrug Resistant Escherichia coli Strains Using Proteomic Approaches

TEKŞEN K., ŞARDAN EKİZ M., Özel S., POLAT C., KILINÇ G. M., ALTUNER E. M., et al.
17th International Symposium on Health Informatics and Bioinformatics, İstanbul, Turkey, 18 - 20 December 2024, (Summary Text)

5. Computing ages of alleles associated with rare autoinflammatory diseases in Anatolia

Karadavut D., Kilinc G. M., YET İ.
57th Conference of the European-Society-of-Human-Genetics (ESHG), Berlin, Germany, 1 - 04 June 2024, vol.32, pp.1739, (Summary Text)

6. Unveiling The Proteomic Signature of Turkish Monofloral Honeys

Özel S., Şardan Ekiz M., Yet İ., Gençay Çelemli Ö., Çelikbıçak Ö.
6. Uluslararası Proteomik Kongresi, Kocaeli, Turkey, 11 - 12 October 2024, pp.53, (Summary Text)

7. Decoding the Unique Metabolome of Turkish Monofloral Honeys Using TimsTOF-MS

Çelikbıçak Ö., Arslanoğlu M. O., Özel S., Şardan Ekiz M., Yet İ., Gençay Çelemli Ö.
6.. Uluslararası Proteomik Kongresi, , Kocaeli, Turkey, 11 - 12 October 2024, pp.52, (Summary Text)

8. Bal Metabolitlerinin Zenginleştirilmesi ve GC-MS Temelli Metabolomik Yaklaşımla İncelenmesi

Arslanoğlu M. O., Özel S., Şardan Ekiz M., Yet İ., Gençay Çelemli Ö., Çelikbıçak Ö.
35. Ulusal Kimya Kongresi, Diyarbakır, Turkey, 9 - 12 September 2024, pp.628, (Summary Text)

9. Profiling Metabolites in Regional Monofloral Turkish Honeys Using GC-MS

Pektaş S., Özel S., Şardan Ekiz M., Yet İ., Gençay Çelemli Ö., Çelikbıçak Ö.
3rd. International Food Chemistry Congress, Antalya, Turkey, 29 February - 03 March 2024, pp.21, (Summary Text)

10. Delving into the Proteins of Turkish Monofloral Honeys Proteomic Study

Özel S., Pektaş S., Şardan Ekiz M., Yet İ., Gençay Çelemli Ö., Çelikbıçak Ö.
5. Uluslararası Proteomik Kongresi, Ankara, Turkey, 13 - 14 October 2023, pp.63, (Summary Text)

11. CLINICOPATHOLOGIC CORRELATIONS OF URINARY PROTEOMIC AND METABOLOMIC ANALYSIS IN PATIENTS WITH RENAL AA AMYLOIDOSIS AND MEMBRANOUS NEPHROPATHY

Ozbek D. A., Koc S., YET İ., Kucuk N. E., ERDOĞAN KABLAN S., ÜNER M., et al.
60th ERA Congress, Milan, Italy, 15 - 18 June 2023, vol.38, (Summary Text) Sustainable Development

12. Mendel randomizasyon yaklaşımları ile alternatif modelin karmaşık verilerdeki nedensel ilişkilerinin karşı-laştırılması

YET İ.
14. Tıp Bilişimi Kongresi, İzmir, Turkey, 16 March 2023, (Summary Text)

13. A comparative analysis on ancient genomic data: The impact of variant discovery approach on population genetics tests

Taç İ., Işıldak U., Çubukcu H., Karadavut D., Vural K. B., Altınışık N. E., et al.
15th International Symposium on Health Informatics and Bioinformatics HIBIT’22 (20-22 October 2022), Mersin, Turkey, 20 - 22 October 2022, pp.26, (Summary Text)

14. EXPLORING GUT MICROBIOTA COMPOSITION OF DISEASE SEVERITY IN AUTO-INFLAMMATORY DISEASE

YET İ.
8th World Congress on Targeting Microbiota 2021, Paris, France, 20 October 2021, (Summary Text)

15. A PILOT PROTEOMIC ANALYSIS OF PLASMA BIOMARKERS IN IGA VASCULITIS

DEMİR S., Sardan M., YET İ., SAĞ E., BİLGİNER Y., ÇELİKBIÇAK Ö., et al.
Annual European Congress of Rheumatology (EULAR), ELECTR NETWORK, 03 June 2020, vol.79, pp.1200-1201, (Summary Text) Creative Commons License

16. MULTI-OMICS INTEGRATION WITH BAYESIAN NETWORKS

YET İ.
12. TIP BİLİŞİMİ KONGRESİ, Turkey, 15 - 16 November 2019, (Summary Text)

17. The BRC Allergene Project: heritability of nickel allergy and genetic determinants

Tsakok T., Quaye L., Bevan L., Menni C., Moayyeri A., YET İ., et al.
Spring Meeting for Clinician Scientists in Training, London, Canada, 27 February 2013, pp.16, (Summary Text)
Books 1

1. Comparative Metabolomics Analysis

YET İ.
in: Encyclopedia of Bioinformatics and Computational Biology, Cannataro Mario, Khan Mohammad Asif, Ranganathan Shoba, Editor, Elsevier, pp.528-535, 2025
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51

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35

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31

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3822

H-Index (WoS)

18

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3935

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19

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5581

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21

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4

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1

Project

28

Thesis Advisory

9

Open Access

21
UN Sustainable Development Goals
SDG 2: GOAL 2: ZERO HUNGER
SDG 3: GOAL 3: GOOD HEALTH AND WELL-BEING
SDG 17: GOAL 17: PARTNERSHIPS FOR THE GOALS