Yayınlar & Eserler

Yayın Ağı
Makaleler 40
Tümü (40)
SCI-E, SSCI, AHCI (40)
SCI-E, SSCI, AHCI, ESCI (40)
Scopus (40)

1. Molecular Insights into Outer Dynein Arm Defects in Primary Ciliary Dyskinesia: Involvement of ZMYND10 and GRP78

Erdem I. L., Kaya Z. B., ATİLLA P., EMİRALİOĞLU ORDUKAYA N., EYLEM C. C., NEMUTLU E., et al.
CELLS , sa.12, 2025 (SCI-Expanded, Scopus) identifier identifier

2. Circadian rhythm and aryl hydrocarbon receptor crosstalk in bone marrow adipose tissue and implications in leukemia

Muratoglu B., ÖZDEMİR SAKA C., EYLEM C. C., REÇBER T., NEMUTLU E., YET İ., et al.
SCIENTIFIC REPORTS , sa.1, 2025 (SCI-Expanded, Scopus) identifier identifier

3. Integrative Multi-Omics Approach in Human Colon Adenocarcinoma Cell Line: Identification of Phenotypic Changes Observed in Cisplatin and 5-Fluorouracil Resistance

Ozen G., EYLEM C. C., BAYSAL İ., Kocak E., YABANOĞLU ÇİFTÇİ S., KIR S., et al.
MICROCHEMICAL JOURNAL , 2025 (SCI-Expanded, Scopus) identifier

4. N-acetylcysteine stimulates organelle malfunction in endometriotic cells via IFN-gamma signaling

KARAKOÇ E., OSKAY HALAÇLI S., HANELCI R. H., AYHAN S., EYLEM C. C., NEMUTLU E., et al.
SCIENTIFIC REPORTS , sa.1, 2025 (SCI-Expanded, Scopus) identifier identifier

5. Detailed characterization of bone marrow adipose tissue mesenchymal stem cells in healthy donor, Fanconi anemia, and acute myeloid leukemia

Muratoglu B., ÖZDEMİR SAKA C., EYLEM C. C., REÇBER T., NEMUTLU E., ALPDÜNDAR BULUT E., et al.
BONE , 2025 (SCI-Expanded, Scopus) identifier identifier

6. Tracing of Amino Acids Dynamics in Cell Lines Based on 18O Stable Isotope Labeling

EYLEM C. C., BAYSAL İ., YABANOĞLU ÇİFTÇİ S., NEMUTLU E.
ANALYTICAL CHEMISTRY , sa.4, ss.2143-2152, 2025 (SCI-Expanded, Scopus) identifier identifier

7. Optimized high-throughput protocols for comprehensive metabolomic and lipidomic profiling of brain sample

EYLEM C. C., NEMUTLU E., DOĞAN A., Acik V., Matyar S., Gezercan Y., et al.
TALANTA , cilt.282, 2025 (SCI-Expanded, Scopus) identifier identifier identifier

8. Biological activities, Peptidomics and in silico analysis of low-fat Cheddar cheese after in vitro digestion: Impact of blending camel and bovine Milk

Ali A. H., ÖZTÜRK H. İ., EYLEM C. C., NEMUTLU E., Tarique M., Subhash A., et al.
FOOD CHEMISTRY , cilt.460, 2024 (SCI-Expanded, Scopus) identifier identifier identifier

9. Glutamine withdrawal leads to the preferential activation of lipid metabolism in metastatic colorectal cancer

Taskiran A. E. G., Karaoglu D. A., EYLEM C. C., Ermis C., Guederer I., NEMUTLU E., et al.
TRANSLATIONAL ONCOLOGY , cilt.48, 2024 (SCI-Expanded, Scopus) identifier identifier identifier

10. Omic Studies on In Vitro Cystinosis Model: siRNA-Mediated CTNS Gene Silencing in HK-2 Cells

Baysal İ., YABANOĞLU ÇİFTÇİ S., NEMUTLU E., EYLEM C. C., Gök-Topak E. D., ULUBAYRAM K., et al.
Laboratory investigation; a journal of technical methods and pathology , cilt.104, sa.1, ss.100287, 2024 (SCI-Expanded, Scopus) identifier identifier identifier

11. Manipulating macrophage polarization with nanoparticles to control metastatic behavior in heterotypic breast cancer micro-tissues via exosome signaling

Sungu M., Isik M., GÜLER Ü., EYLEM C. C., ESKİZENGİN H., NEMUTLU E., et al.
Nanoscale , cilt.16, sa.1, ss.394-410, 2023 (SCI-Expanded, Scopus) identifier identifier identifier

12. Molecular docking, synthesis, anticancer activity, and metabolomics study of boronic acid ester-containing fingolimod derivatives

DOYDUK D., DERKUŞ B., Sari B., EYLEM C. C., NEMUTLU E., YILDIRIR Y.
Archiv der Pharmazie , cilt.356, sa.12, 2023 (SCI-Expanded, Scopus) identifier identifier identifier

13. Bioactive and chemically defined hydrogels with tunable stiffness guide cerebral organoid formation and modulate multi-omics plasticity in cerebral organoids

Isik M., Okesola B. O., EYLEM C. C., Kocak E., NEMUTLU E., D'Este M., et al.
Acta Biomaterialia , cilt.171, ss.223-238, 2023 (SCI-Expanded, Scopus) identifier identifier identifier

14. 3D Printing of Extracellular Matrix-Based Multicomponent, All-Natural, Highly Elastic, and Functional Materials toward Vascular Tissue Engineering

Isik M., Karakaya E., Arslan T. S., Atila D., ERDOĞAN Y. K., ARSLAN Y. E., et al.
Advanced Healthcare Materials , cilt.12, sa.20, 2023 (SCI-Expanded, Scopus) identifier identifier identifier

15. The effect of mitochondria-targeted slow hydrogen sulfide releasing donor AP39-treatment on airway inflammation

KARAMAN Y., Kaya-Yasar Y., Eylem C. C., ÖNDER S. Ç., NEMUTLU E., BOZKURT T. E., et al.
European Journal of Pharmacology , cilt.946, 2023 (SCI-Expanded, Scopus) identifier identifier identifier

16. Metabolomic Analyses to Identify Candidate Biomarkers of Cystinosis

NEMUTLU E., ÖZALTIN F., YABANOĞLU ÇİFTÇİ S., GÜLHAN B., Eylem C. C., BAYSAL İ., et al.
International Journal of Molecular Sciences , cilt.24, sa.3, 2023 (SCI-Expanded, Scopus) Creative Commons License identifier identifier identifier

17. Green Alternatives in Pharmaceutical and Bioanalytical Analysis of TDM Required Drugs: Procainamide

Ülgen M., EYLEM C. C., DOĞAN A., Akduman N. E. B.
Combinatorial Chemistry and High Throughput Screening , cilt.26, sa.15, ss.2656-2667, 2023 (SCI-Expanded, Scopus) identifier identifier identifier

18. CANDIDATE BIOMARKER(S) FOR CYSTINOSIS WITH OMIC-BASED TECHNOLOGY: FROM LABORATORY TO BED-SIDE

NEMUTLU E., Eylem C. C., GÜLHAN B., BAYSAL İ., Yabanoglu-Ciftci S., KIR S., et al.
PEDIATRIC NEPHROLOGY , cilt.37, sa.11, ss.2831, 2022 (SCI-Expanded, Scopus) identifier

19. MITOCHONDRIA-TARGETED COQ10 FORMULATION FOR THE TREATMENT OF COQ10 NEPHROPATHIES

Ozbay H. S., Ciftci S. Y., BAYSAL İ., GÜLTEKİNOĞLU BAYRAM M., Eylem C. C., ULUBAYRAM K., et al.
PEDIATRIC NEPHROLOGY , cilt.37, sa.11, ss.2830-2831, 2022 (SCI-Expanded, Scopus) identifier

20. Tuning the Cell-Adhesive Properties of Two-Component Hybrid Hydrogels to Modulate Cancer Cell Behavior, Metastasis, and Death Pathways

Isik M., Okesola B. O., Eylem C. C., Kocak E., NEMUTLU E., EMREGÜL E., et al.
BIOMACROMOLECULES , cilt.23, sa.10, ss.4254-4267, 2022 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

21. High-Throughput Single-Step plasma sample extraction optimization strategies with experimental design for LC-MS and GC-MS integrated metabolomics and lipidomics analysis

Eylem C. C., NEMUTLU E., DOĞAN A., Acik V., Matyar S., Gezercan Y., et al.
MICROCHEMICAL JOURNAL , cilt.179, 2022 (SCI-Expanded, Scopus) identifier identifier

22. Omics technologies for high-throughput-screening of cell-biomaterial interactions

Sari B., Isik M., Eylem C. C., Bektas C., Okesola B. O., Karakaya E., et al.
MOLECULAR OMICS , cilt.18, sa.7, ss.591-615, 2022 (SCI-Expanded, Scopus) identifier identifier identifier

23. Do Thickening Agents Used in Dysphagia Diet Affect Drug Bioavailability?

ILGAZ F., TİMUR S. S., Eylem C. C., NEMUTLU E., EROĞLU ERDEM Ç., EROĞLU H., et al.
EUROPEAN JOURNAL OF PHARMACEUTICAL SCIENCES , cilt.174, 2022 (SCI-Expanded, Scopus) identifier identifier identifier

24. Xenogenic Neural Stem Cell-Derived Extracellular Nanovesicles Modulate Human Mesenchymal Stem Cell Fate and Reconstruct Metabolomic Structure

DERKUŞ B., Isik M., Eylem C. C., ERGİN İ., Camci C. B., Bilgin S., et al.
ADVANCED BIOLOGY , cilt.6, sa.6, 2022 (SCI-Expanded) identifier identifier identifier

25. Liquid biopsy markers for early diagnosis of brain metastasis patients with breast cancer by metabolomics

Ozer O., NEMUTLU E., REÇBER T., Eylem C. C., AKTAŞ B. Y., KIR S., et al.
EUROPEAN JOURNAL OF MASS SPECTROMETRY , cilt.28, sa.1-2, ss.56-64, 2022 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

26. Mitochondria-targeted CoQ(10) loaded PLGA-b-PEG-TPP nanoparticles: Their effects on mitochondrial functions of COQ8B(-/-) HK-2 cells

Sena Ozbay H., Yabanoglu-Ciftci S., Baysal I., Gultekinoglu M., Can Eylem C. C., Ulubayram K., et al.
EUROPEAN JOURNAL OF PHARMACEUTICS AND BIOPHARMACEUTICS , cilt.173, ss.22-33, 2022 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

27. State-of-the-art GC-MS approaches for probing central carbon metabolism

Eylem C. C., REÇBER T., Waris M., KIR S., NEMUTLU E.
MICROCHEMICAL JOURNAL , cilt.172, 2022 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier

28. Mechanically robust hybrid hydrogels of photo-crosslinkable gelatin and laminin-mimetic peptide amphiphiles for neural induction

Isik M., Eylem C. C., Haciefendioglu T., YILDIRIM E., Sari B., NEMUTLU E., et al.
BIOMATERIALS SCIENCE , cilt.9, ss.8270-8284, 2021 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

29. Neuroactivity of the naturally occurring aporphine alkaloid, roemerine

Bayazeid O., NEMUTLU E., Eylem C. C., Ilhan M., Kupeli-Akkol E., KARAHAN H., et al.
NATURAL PRODUCT RESEARCH , cilt.35, sa.24, ss.6147-6152, 2021 (SCI-Expanded, Scopus) identifier identifier identifier

30. Decellularized spinal cord meninges extracellular matrix hydrogel that supports neurogenic differentiation and vascular structure formation

ÖZÜDOĞRU E., Isik M., Eylem C. C., NEMUTLU E., ARSLAN Y. E., Derkus B.
JOURNAL OF TISSUE ENGINEERING AND REGENERATIVE MEDICINE , cilt.15, sa.11, ss.948-963, 2021 (SCI-Expanded, Scopus) identifier identifier identifier

31. Reduced mitochondrial fission and impaired energy metabolism in human primary skeletal muscle cells of Megaconial Congenital Muscular Dystrophy

AKSU MENGEŞ E., Eylem C. C., NEMUTLU E., Gizer M., KORKUSUZ P., Topaloglu H., et al.
SCIENTIFIC REPORTS , cilt.11, sa.1, 2021 (SCI-Expanded, Scopus) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

32. Salbutamol Delivered by Jet Nebulizer: Closed System Design and Impact of a Model Biofilm

ÖCAL S., ÖZEN S., NEMUTLU E., KART D., Eylem C. C., TOPELİ İSKİT A.
RESPIRATORY CARE , cilt.66, sa.9, ss.1440-1445, 2021 (SCI-Expanded, Scopus) identifier identifier identifier

33. Gas chromatography-mass spectrometry based O-18 stable isotope labeling of Krebs cycle intermediates

Eylem C. C., BAYSAL İ., Erikci A., YABANOĞLU ÇİFTÇİ S., Zhang S., KIR S., et al.
ANALYTICA CHIMICA ACTA , cilt.1154, 2021 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

34. An Overview of Green Chromatographic Analysis from Pharmaceutical Preparations

DOĞAN A., Eylem C. C., BAŞCI AKDUMAN N. E.
CURRENT ANALYTICAL CHEMISTRY , cilt.17, sa.9, ss.1260-1277, 2021 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier

35. Neuroactivity of naturally occurring proaporphine alkaloid, pronuciferine

Bayazeid O., NEMUTLU E., Eylem C. C., Yalcin F. N.
JOURNAL OF BIOCHEMICAL AND MOLECULAR TOXICOLOGY , cilt.34, sa.12, 2020 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

36. Polymeric Nanoparticle Versus Liposome Formulations: Comparative Physicochemical and Metabolomic Studies as l-Carnitine Delivery Systems

Yasacan M., Erikci A., Eylem C. C., Ciftci S. Y., NEMUTLU E., ULUBAYRAM K., et al.
AAPS PHARMSCITECH , cilt.21, sa.8, 2020 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

37. Integration of GC-MS and LC-MS for untargeted metabolomics profiling

Zeki O. C., Eylem C. C., REÇBER T., KIR S., NEMUTLU E.
JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS , cilt.190, 2020 (SCI-Expanded, Scopus) identifier identifier identifier

38. Application of green methodology to pharmaceutical analysis using eco-friendly ethanol-water mobile phases

DOĞAN A., Eylem C. C., BAŞCI AKDUMAN N. E.
MICROCHEMICAL JOURNAL , cilt.157, 2020 (SCI-Expanded, Scopus) identifier identifier

39. Untargeted multi-omic analysis of colorectal cancer-specific exosomes reveals joint pathways of colorectal cancer in both clinical samples and cell culture

Eylem C. C., YILMAZ M., DERKUŞ B., NEMUTLU E., Camci C. B., YILMAZ E., et al.
CANCER LETTERS , cilt.469, ss.186-194, 2020 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier

40. An LC-ESI-MS/MS method for the simultaneous determination of pronuciferine arid roemerine in some Papaver species

Bayazeid O., Eylem C. C., REÇBER T., YALÇIN F. N., KIR S., NEMUTLU E.
JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES , cilt.1096, ss.223-227, 2018 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma identifier identifier identifier
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler 12

1. A mechanistic evaluation of the differential response of SW480 and SW620 colon carcinoma cell lines to L-Glutamine Starvation

GÜLEÇ TAŞKIRAN A. E., GÜDERER İ., EYLEM C. C., NEMUTLU E., BANERJEE S.
EACR Signaling Circuits, 13 Şubat 2024, (Özet Bildiri)

2. Impact of Distinct Bacterial Populations on Brain Organoid Phenotype

DERKUŞ B., IŞIK M., EYLEM C. C., EMREGÜL E., NEMUTLU E.
5th Eurasia Biochemical Approaches & Technologies Congress (EBAT5), Antalya, Türkiye, 2 - 05 Kasım 2023, ss.70, (Özet Bildiri)

3. Cardiopulmonary Bypass and Hypothermia-Induced Alterations in Plasma Metabolome Profile in Adult Cardiac Surgery

Durmaz O., EYLEM C. C., NEMUTLU E., EMREGÜL E., ÖZÇINAR E., DAĞ O., et al.
5th Eurasia Biochemical Approaches & Technologies Congress (EBAT 5), Antalya, Türkiye, 02 Kasım 2023, ss.88, (Özet Bildiri)

4. 18O Assisted GC-MS Based Fluxomics Analysis for Central Carbon Metabolism Intermediates in Colorectal Cancer Cell Line

EYLEM C. C.
PBA2023 33rd International Symposium on Pharmaceutical and Biomedical Analysis, Ankara, Türkiye, 2 - 06 Temmuz 2023, (Özet Bildiri)

5. Pharmacometabolomics: The Bioavailability of Levetiracetam

Zeki Ö. C., EYLEM C. C., ILGAZ F., TİMUR S. S., EROĞLU ERDEM Ç., EROĞLU H., et al.
ASPAC 2022-11th Annual Symposium on Physical and Analytical Chemistry, Tiflis, Gürcistan, 08 Aralık 2022, (Özet Bildiri)

6. High Throughput Extraction Strategies for Cell Culture Medium-Based Untargeted Exometabolomics Studies

NEMUTLU E., REÇBER T., EYLEM C. C., ERDOĞAN KABLAN S., Özesen S., DERKUŞ B., et al.
2nd European Sample Preparation Conference (EuSP2022), Türkiye, 14 - 16 Mart 2022, (Özet Bildiri)

7. Detection of brain metastasis by metabolomics methods in metastatic breast cancer patients.

Özer Ö., NEMUTLU E., Eylem C. C., KIR S., REÇBER T., Aktas B. Y., et al.
2019 ASCO Annual Meeting, Amerika Birleşik Devletleri, 30 Mayıs - 03 Haziran 2019, cilt.37, ss.12572, (Tam Metin Bildiri) Sürdürülebilir Kalkınma

8. Optimization of A HILIC Based LC-ESI-MS/MS Method forQuantification of Phosphonucleotides in Cancer Cell Lines

Eylem C. C., DOĞAN A., ERİKÇİ A., YABANOĞLU ÇİFTÇİ S., KIR S., NEMUTLU E.
18th INTERNATIONAL CHROMATOGRAPHY CONGRESS, 15 - 18 Kasım 2018, (Tam Metin Bildiri) Sürdürülebilir Kalkınma

9. GREEN HPLC USING ECOFRIENDLYETHANOL BASED MOBILEPHASES IN PHARMACEUTICAL ANALYSIS

DOĞAN A., Eylem C. C., BAŞCI N. E.
12th International Symposium on Pharmaceutical Sciences, ISOPS, 26 - 29 Haziran 2018, (Tam Metin Bildiri)

10. A LC-MS/MS Method for the Simultaneous Determination of Pronuciferine and Romerine in Some Papaver Species

EYLEM C. C., BAYAZEID O., REÇBER T., NEMUTLU E., YALÇIN F. N., KIR S.
Intenational Multidisiplinary Symposium on Drug Research and Development (DRD), 5 - 07 Ekim 2017, (Özet Bildiri)

11. Normalization Effects on the Repeatability of Long Term GC-MS Metabolomic Analysis

Özen G., REÇBER T., Eylem C. C., KIR S., NEMUTLU E.
Intenational Multidisiplinary Symposium on Drug Research and Development (DRD), 5 - 07 Ekim 2017, (Özet Bildiri)

12. GC-MS Based Metabolomic Profile of Caco 2 Cell Lines

özen G., BAYSAL İ., Eylem C. C., YABANOĞLU ÇİFTÇİ S., KIR S., NEMUTLU E.
3 rd International Multidisciplinary Symposium on Drug Research and Development - DRD 2017, 5 - 07 Ekim 2017, (Özet Bildiri)
Kitaplar 4

1. Proteolytic digestion methods for shotgun proteomics

EYLEM C. C., NEMUTLU E.
Comprehensive Sampling and Sample Preparation, 2e, , Editör, Elsevier, ss.261-276, 2024

2. Liquid chromatography in proteomics research

KOÇAK E., EYLEM C. C., NEMUTLU E.
Liquid Chromatography, Salvatore Fanali, Paul R. Haddad, Marja-Liisa Riekkola, Bezhan Chankvetadze, Colin F. Poole, Editör, Elsevier, ss.331-356, 2023

3. Chapter 20 - Analytical perspective on biomarkers research: from untargeted to targeted metabolomics

NEMUTLU E., Eylem C. C., REÇBER T., GÖK TOPAK E. D., DOĞAN A., KIR S.
The Detection of Biomarkers, Sibel A. Ozkan, Nurgul K. Bakirhan, Fariba Mollarasouli, Editör, Elsevier, ss.545-586, 2022

4. Analytical perspective on biomarkers research: from untargeted to targeted metabolomics

NEMUTLU E., Eylem C. C., REÇBER T., GÖK TOPAK E. D., DOĞAN A., KIR S.
The Detection of Biomarkers Past, Present, and the Future Prospects, Ozkan Sibel A.; Bakirhan Nurgul K.; Mollarasouli Fariba, Editör, Academic Press, ss.545-586, 2022