Prof. YUSUF ÇETİN KOCAEFE | AVESİS

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Publications & Works

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Published journal articles indexed by SCI, SSCI, and AHCI

ACPA decreases non-small cell lung cancer line growth through Akt/PI3K and JNK pathways in vitro.

Boyacioglu O., BİLGİÇ E., VARAN C., BİLENSOY E., NEMUTLU E., GÜLMEZ SEVİM D., et al.

Cell death & disease, vol.12, no.1, pp.56, 2021 (SCI-Expanded)

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Sustainable Development

A Novel Amplification-Refractory Mutation System-PCR Strategy to Screen MT-TL1 Pathogenic Variants in Patient Repositories

Bulduk B. K., Kilic H. B., Bekircan-Kurt C. E., Haliloglu G., ERDEM ÖZDAMAR S., Topaloglu H., et al.

GENETIC TESTING AND MOLECULAR BIOMARKERS, vol.24, no.3, pp.165-170, 2020 (SCI-Expanded)

A single-tube multiplex qPCR assay for mitochondria DNA (mtDNA) copy number assessment

Kilic H. B., Bulduk B. K., KOCAEFE Y. Ç.

TURKISH JOURNAL OF BIOCHEMISTRY-TURK BIYOKIMYA DERGISI, vol.44, no.6, pp.769-777, 2019 (SCI-Expanded)

Bone marrow derived mesenchymal stem cells ameliorate inflammatory response in an in vitro model of familial hemophagocytic lymphohistiocytosis 2

SEVİM H., KOCAEFE Y. Ç., ONUR M. A., Uckan-Cetinkaya D., GÜRPINAR Ö. A.

STEM CELL RESEARCH & THERAPY, vol.9, 2018 (SCI-Expanded)

GENERATION OF INDUCED PLURIPOTENT STEM CELLS FROM MESENCHYMAL STEM CELLS OF OSTEOPETROSIS PATIENTS BY TWO DIFFERENT INTEGRATION-FREE METHODS UNDER FEEDER-FREE CONDITIONS

Okur F. V., Cevher I., Kilic E., Ozdemir C., Kocaefe C., Cetinkaya D. U.

CYTOTHERAPY, vol.20, no.5, 2018 (SCI-Expanded)

Tenotomy immobilization as a model to investigate skeletal muscle fibrosis (with emphasis on Secreted frizzled-related protein 2)

AKPULAT U., ONBAŞILAR İ., KOCAEFE Y. Ç.

PHYSIOLOGICAL GENOMICS, vol.48, no.6, pp.397-408, 2016 (SCI-Expanded)

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In Vitro Comparison of Adipokine Export Signals

Sharafi P., KOCAEFE Y. Ç.

PROTEIN AND PEPTIDE LETTERS, vol.23, no.6, pp.530-536, 2016 (SCI-Expanded)

Effect of Zoledronic Acid on Rats' Tissue SDF-1 Expression

Arik Z., KILIÇKAP S., AKPULAT U., Nahit Sendur M. A., KOCAEFE Y. Ç., ERMAN M.

UHOD-ULUSLARARASI HEMATOLOJI-ONKOLOJI DERGISI, vol.26, no.4, pp.215-219, 2016 (SCI-Expanded)

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Sustainable Development

AEBP1/ACLP is upregulated in differentiation, injury repair and fibrotic degeneration of skeletal muscle

Özdemir C., AKPULAT U., Akçay D., ONBAŞILAR İ., KOCAEFE Y. Ç.

JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY, vol.36, no.6, pp.549-550, 2015 (SCI-Expanded)

Generation of targeted insertion in the Klf5 gene of mouse myoblasts (C2C12 cells) using CRISPR/Cas9 system

Akçay D., AKPULAT U., KOCAEFE Y. Ç.

JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY, vol.36, no.6, pp.547-548, 2015 (SCI-Expanded)

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Periostin is temporally expressed as an extracellular matrix component in skeletal muscle regeneration and differentiation

OZDEMIR C., Akpulat U., SHARAFI P., YILDIZ Y., ONBAŞILAR İ., Kocaefe C.

GENE, vol.553, no.2, pp.130-139, 2014 (SCI-Expanded)

Coronin 1A inhibits neurite outgrowth in PC12 cells

TERZI Y. K., KOCAEFE Y. Ç., AYTER S.

NEUROSCIENCE LETTERS, vol.582, pp.38-42, 2014 (SCI-Expanded)

Novel mutations of the MLC1 gene in Turkish patients

YÜZBAŞIOĞLU A., TOPÇU M., KOCAEFE Y. Ç., ÖZGÜÇ M.

EUROPEAN JOURNAL OF MEDICAL GENETICS, vol.54, no.3, pp.281-283, 2011 (SCI-Expanded)

Reprogramming of Human Umbilical Cord Stromal Mesenchymal Stem Cells for Myogenic Differentiation and Muscle Repair

Kocaefe C., Balci D., Hayta B. B., Can A.

STEM CELL REVIEWS AND REPORTS, vol.6, no.4, pp.512-522, 2010 (SCI-Expanded)

Assessment of housekeeping genes for use in normalization of real time PCR in skeletal muscle with chronic degenerative changes

Yuzbasioglu A., Onbasilar I., Kocaefe C., Ozguc M.

EXPERIMENTAL AND MOLECULAR PATHOLOGY, vol.88, no.2, pp.326-329, 2010 (SCI-Expanded)

Histone Deacetylase Inhibition Activity and Molecular Docking of (E )-Resveratrol: Its Therapeutic Potential in Spinal Muscular Atrophy

Dayangac-Erden D., Bora G., Ayhan P., Kocaefe C., DALKARA S., Yelekci K., et al.

CHEMICAL BIOLOGY & DRUG DESIGN, vol.73, no.3, pp.355-364, 2009 (SCI-Expanded)

Adipocyte differentiation defect in mesenchymal stromal cells of patients with malignant infantile osteopetrosis

Uckan D., KILIÇ E., SHARAFI P., Kazik M., Kaya F. A., Erdemli E., et al.

CYTOTHERAPY, vol.11, no.4, pp.392-402, 2009 (SCI-Expanded)

Changes in the expression of selenoproteins in mesial temporal lobe epilepsy patients

YÜZBAŞIOĞLU A., Karatas H., GURSOY-OZDEMIR Y., Saygi S., Akalan N., Soylemezoglu F., et al.

Cellular and Molecular Neurobiology, vol.29, no.8, pp.1223-1231, 2009 (SCI-Expanded)

Functional structure of adipocytes differentiated from human umbilical cord stroma-derived stem cells

Karahuseyinoglu S., Kocaefe C., Balci D., Erdemli E., Can A.

STEM CELLS, vol.26, no.3, pp.682-691, 2008 (SCI-Expanded)

Statin potentiates human platelet eNOS activity without enhancing eNOS mRNA and protein levels

Yemisci M., AY H., Kocaefe C., Qui J., Topalkara K., ÖZGÜÇ M., et al.

CEREBROVASCULAR DISEASES, vol.26, no.2, pp.190-198, 2008 (SCI-Expanded)

Biology of stem cells in human umbilical cord stroma: In situ and in vitro surveys

Karahuseyinoglu S., Cinar O., Kilic E., Kara F., Akay G. G., Demiralp D. O., et al.

STEM CELLS, vol.25, no.2, pp.319-331, 2007 (SCI-Expanded)

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The Genetic Basis of the Polycystic Ovary Syndrome: A Literature Review Including Discussion of PPAR-gamma

UNLUTURK U., Harmanci A., Kocaefe C., YILDIZ B.

PPAR RESEARCH, vol.2007, 2007 (SCI-Expanded)

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Interleukin-10 gene transfer: Prevention of multiple organ injury in a murine cecal ligation and puncture model of sepsis

KABAY B., Kocaefe C., Baykal A., OEZDEN H., BAYCU C., ONER Z., et al.

WORLD JOURNAL OF SURGERY, vol.31, no.1, pp.105-115, 2007 (SCI-Expanded)

Liposome-mediated intraperitoneal interleukin 10 gene transfer increases survival in cecal ligation and puncture model of sepsis

Kabay B., Kocaefe Y. C., Baykal A., Ozguc M., SAYEK I.

SHOCK, vol.26, no.1, pp.37-40, 2006 (SCI-Expanded) Sustainable Development

Sustainable Development

Androgen receptor immunostaining and androgen receptor messenger ribonucleic acid expression are increased in cremaster muscles associated with undescended testis

Tanyel F. C., Yuzbasioglu A., Kocaefe C., Orhan D., Ozguc M.

UROLOGY, vol.67, no.4, pp.855-858, 2006 (SCI-Expanded)

Myogenic program induction in mature fat tissue (with MyoD expression)

Kocaefe Y. Ç., ISRAELI D., Ozguc M., DANOS O., GARCIA L.

EXPERIMENTAL CELL RESEARCH, vol.308, no.2, pp.300-308, 2005 (SCI-Expanded)

Four-month-old infant with focal segmental glomerulosclerosis and mitochondrial DNA deletion

Unal S., Kalkanoglu H., Kocaefe C., Gueer S., Ozen S., TURANLI G., et al.

JOURNAL OF CHILD NEUROLOGY, vol.20, no.1, pp.83-84, 2005 (SCI-Expanded)

Expression of matrix metalloproteinases in vasculitic neuropathy

Gurer G., Erdern S., Kocaefe C., Ozguc M., Tan E.

RHEUMATOLOGY INTERNATIONAL, vol.24, no.5, pp.255-259, 2004 (SCI-Expanded)

Four novel thymidine phosphorylase gene mutations in mitochondrial neurogastrointestinal encephalomyopathy syndrome (MNGIE) patients

Kocaefe Y. Ç., Erdem S., Ozguc M., Tan E.

EUROPEAN JOURNAL OF HUMAN GENETICS, vol.11, no.1, pp.102-104, 2003 (SCI-Expanded)

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Calcium-antagonistic activity of sumatriptan in the rat anococcygeus muscle

Emre-Aydingoz S., Kocaefe C., Tuncer M.

PHARMACOLOGY, vol.64, no.1, pp.43-48, 2002 (SCI-Expanded)

Articles Published in Other Journals

Role of echocardiography on early diagnosis of atrial remodelling and fibrosis in elite athletes

YILDIRIM A., TOKGÖZOĞLU S. L., Yıldırım M., Şener Y. Z., OKŞUL M., Akçay D., et al.

International Journal of Cardiovascular Imaging, 2023 (Scopus)

Refereed Congress / Symposium Publications in Proceedings

Characterization of the Cellular Localization andExpression of AEBP1/ACLP Transcripts with anUnknown Function in Myoblasts

kılıç h. b., akçay d., sevim d., ÖZDEMİR SAKA C., KOCAEFE Y. Ç.

Molbiokon18 6th International Congress of theMolecular Biology Association of Turkey, 5 - 08 September 2018

Assessment of the Role of Tgf-beta and 3D Echocardiographic Evaluation in the Early Diagnosis of Atrial Remodelling in Elite Athletes

YILDIRIM A., TOKGÖZOĞLU S. L., YILDIRIM M., KOCAEFE Y. Ç., DÖNMEZ G., ŞENER Y. Z., et al.

ESC Congress 2018, MUNCHEN, Germany, 25 - 29 August 2018

The Fibrogenic Activation Kinetics of Stromal Stem Cells in Three Different Skeletal Muscle Degeneration Models

ÖZDEMİR SAKA C., AKÇAY D., YÖYEN ERMİŞ D., ESENDAĞLI G., KOCAEFE Y. Ç.

43rd FEBS CONGRESS, 7 - 12 July 2018

Comparative Transcriptome Analysis of Distinct Stromal Cell Populations During Extracellular Matrix Remodeling in Skeletal Muscle

ÖZDEMİR SAKA C., AKÇAY D., YÖYEN ERMİŞ D., TAŞKIRAN Z. E., ESENDAĞLI G., KOCAEFE Y. Ç.

13th Meeting of the Mediterrranean Society of Myology, 27 - 29 June 2018, vol.37, pp.129-183

GENERATION OF INDUCED PLURIPOTENT STEM CELLS FROMMESENCHYMAL STEM CELLS OF OSTEOPETROSIS PATIENTSBY TWO DIFFERENT INTEGRATION-FREE METHODS UNDERFEEDER-FREE CONDITIONS

OKUR F. V., CEVHER İ., KILIÇ E., ÖZDEMİR SAKA C., KOCAEFE Y. Ç., ÇETİNKAYA F. D.

ISCT, 2 - 05 May 2018

AEBP1/ACLP is upregulated in differentiation, injury repair and fibrotic degeneration of skeletal muscle

Ozdemir C., Akpulat U., Onbasilar I., Kocaefe C.

41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Turkey, 3 - 08 September 2016, vol.283, pp.287

Generation of targeted insertion in the Klf5 gene of mouse myoblasts (C2C12 cells) using CRISPR/Cas9 system

Akcay D., Kocaefe C.

41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Turkey, 3 - 08 September 2016, vol.283, pp.129

Mitochondrial myopathies: clinical, pathological and genetic features in a large series of patients

Celebi O., Kocaefe C., Ozdamar S. E., Ozguc M., Tan E.

13th Congress of the European-Federation-of-Neurological-Societies, Florence, Italy, 12 - 15 September 2009, vol.16, pp.213

Familial parkinsonism with apathy, depression and central hypoventilation (Perry's syndrome)

Elibol B., Kobayashi T., Atac F., Hattori N., Sahin G., Gurer G., et al.

5th International Conference on the Progress in Alzheimers and Parkinsons Disease/9th International Catecholamine Symposium, Kyoto, Japan, 31 March - 05 April 2001, vol.51, pp.285-290