Yayınlar & Eserler

Yayın Ağı
SCI, SSCI ve AHCI İndekslerine Giren Dergilerde Yayınlanan Makaleler

Pro-fibrogenic and adipogenic aspects of chronic muscle degeneration are contributed by distinct stromal cell subpopulations

ÖZDEMİR SAKA C., Akçay D., Yöyen-Ermiş D., Taşkıran E. Z., Soylu-Kucharz R., ESENDAĞLI G., et al.
PloS one , cilt.18, sa.7, 2023 (SCI-Expanded) Creative Commons License identifier identifier

ACPA decreases non-small cell lung cancer line growth through Akt/PI3K and JNK pathways in vitro.

Boyacioglu O., BİLGİÇ E., VARAN C., BİLENSOY E., NEMUTLU E., GÜLMEZ SEVİM D., et al.
Cell death & disease , cilt.12, sa.1, ss.56, 2021 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier identifier

A Novel Amplification-Refractory Mutation System-PCR Strategy to Screen MT-TL1 Pathogenic Variants in Patient Repositories

Bulduk B. K., Kilic H. B., Bekircan-Kurt C. E., Haliloglu G., ERDEM ÖZDAMAR S., Topaloglu H., et al.
GENETIC TESTING AND MOLECULAR BIOMARKERS , cilt.24, sa.3, ss.165-170, 2020 (SCI-Expanded) identifier identifier identifier

A single-tube multiplex qPCR assay for mitochondria DNA (mtDNA) copy number assessment

Kilic H. B., Bulduk B. K., KOCAEFE Y. Ç.
TURKISH JOURNAL OF BIOCHEMISTRY-TURK BIYOKIMYA DERGISI , cilt.44, sa.6, ss.769-777, 2019 (SCI-Expanded) identifier identifier

Bone marrow derived mesenchymal stem cells ameliorate inflammatory response in an in vitro model of familial hemophagocytic lymphohistiocytosis 2

SEVİM H., KOCAEFE Y. Ç., ONUR M. A., Uckan-Cetinkaya D., GÜRPINAR Ö. A.
STEM CELL RESEARCH & THERAPY , cilt.9, 2018 (SCI-Expanded) identifier identifier identifier

GENERATION OF INDUCED PLURIPOTENT STEM CELLS FROM MESENCHYMAL STEM CELLS OF OSTEOPETROSIS PATIENTS BY TWO DIFFERENT INTEGRATION-FREE METHODS UNDER FEEDER-FREE CONDITIONS

Okur F. V., Cevher I., Kilic E., Ozdemir C., Kocaefe C., Cetinkaya D. U.
CYTOTHERAPY , cilt.20, sa.5, 2018 (SCI-Expanded) identifier

Tenotomy immobilization as a model to investigate skeletal muscle fibrosis (with emphasis on Secreted frizzled-related protein 2)

AKPULAT U., ONBAŞILAR İ., KOCAEFE Y. Ç.
PHYSIOLOGICAL GENOMICS , cilt.48, sa.6, ss.397-408, 2016 (SCI-Expanded) Creative Commons License identifier identifier identifier

In Vitro Comparison of Adipokine Export Signals

Sharafi P., KOCAEFE Y. Ç.
PROTEIN AND PEPTIDE LETTERS , cilt.23, sa.6, ss.530-536, 2016 (SCI-Expanded) identifier identifier

Effect of Zoledronic Acid on Rats' Tissue SDF-1 Expression

Arik Z., KILIÇKAP S., AKPULAT U., Nahit Sendur M. A., KOCAEFE Y. Ç., ERMAN M.
UHOD-ULUSLARARASI HEMATOLOJI-ONKOLOJI DERGISI , cilt.26, sa.4, ss.215-219, 2016 (SCI-Expanded) Creative Commons License Sürdürülebilir Kalkınma identifier identifier

AEBP1/ACLP is upregulated in differentiation, injury repair and fibrotic degeneration of skeletal muscle

Özdemir C., AKPULAT U., Akçay D., ONBAŞILAR İ., KOCAEFE Y. Ç.
JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY , cilt.36, sa.6, ss.549-550, 2015 (SCI-Expanded)

Generation of targeted insertion in the Klf5 gene of mouse myoblasts (C2C12 cells) using CRISPR/Cas9 system

Akçay D., AKPULAT U., KOCAEFE Y. Ç.
JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY , cilt.36, sa.6, ss.547-548, 2015 (SCI-Expanded) Creative Commons License

Periostin is temporally expressed as an extracellular matrix component in skeletal muscle regeneration and differentiation

OZDEMIR C., Akpulat U., SHARAFI P., YILDIZ Y., ONBAŞILAR İ., Kocaefe C.
GENE , cilt.553, sa.2, ss.130-139, 2014 (SCI-Expanded) identifier identifier identifier

Coronin 1A inhibits neurite outgrowth in PC12 cells

TERZI Y. K., KOCAEFE Y. Ç., AYTER S.
NEUROSCIENCE LETTERS , cilt.582, ss.38-42, 2014 (SCI-Expanded) identifier identifier identifier

Novel mutations of the MLC1 gene in Turkish patients

YÜZBAŞIOĞLU A., TOPÇU M., KOCAEFE Y. Ç., ÖZGÜÇ M.
EUROPEAN JOURNAL OF MEDICAL GENETICS , cilt.54, sa.3, ss.281-283, 2011 (SCI-Expanded) identifier identifier identifier

Reprogramming of Human Umbilical Cord Stromal Mesenchymal Stem Cells for Myogenic Differentiation and Muscle Repair

Kocaefe C., Balci D., Hayta B. B., Can A.
STEM CELL REVIEWS AND REPORTS , cilt.6, sa.4, ss.512-522, 2010 (SCI-Expanded) identifier identifier identifier

Assessment of housekeeping genes for use in normalization of real time PCR in skeletal muscle with chronic degenerative changes

Yuzbasioglu A., Onbasilar I., Kocaefe C., Ozguc M.
EXPERIMENTAL AND MOLECULAR PATHOLOGY , cilt.88, sa.2, ss.326-329, 2010 (SCI-Expanded) identifier identifier identifier

Histone Deacetylase Inhibition Activity and Molecular Docking of (E )-Resveratrol: Its Therapeutic Potential in Spinal Muscular Atrophy

Dayangac-Erden D., Bora G., Ayhan P., Kocaefe C., DALKARA S., Yelekci K., et al.
CHEMICAL BIOLOGY & DRUG DESIGN , cilt.73, sa.3, ss.355-364, 2009 (SCI-Expanded) identifier identifier identifier

Adipocyte differentiation defect in mesenchymal stromal cells of patients with malignant infantile osteopetrosis

Uckan D., KILIÇ E., SHARAFI P., Kazik M., Kaya F. A., Erdemli E., et al.
CYTOTHERAPY , cilt.11, sa.4, ss.392-402, 2009 (SCI-Expanded) identifier identifier identifier

Changes in the expression of selenoproteins in mesial temporal lobe epilepsy patients

YÜZBAŞIOĞLU A., Karatas H., GURSOY-OZDEMIR Y., Saygi S., Akalan N., Soylemezoglu F., et al.
Cellular and Molecular Neurobiology , cilt.29, sa.8, ss.1223-1231, 2009 (SCI-Expanded) identifier identifier identifier

Functional structure of adipocytes differentiated from human umbilical cord stroma-derived stem cells

Karahuseyinoglu S., Kocaefe C., Balci D., Erdemli E., Can A.
STEM CELLS , cilt.26, sa.3, ss.682-691, 2008 (SCI-Expanded) identifier identifier identifier

Statin potentiates human platelet eNOS activity without enhancing eNOS mRNA and protein levels

Yemisci M., AY H., Kocaefe C., Qui J., Topalkara K., ÖZGÜÇ M., et al.
CEREBROVASCULAR DISEASES , cilt.26, sa.2, ss.190-198, 2008 (SCI-Expanded) identifier identifier identifier

Biology of stem cells in human umbilical cord stroma: In situ and in vitro surveys

Karahuseyinoglu S., Cinar O., Kilic E., Kara F., Akay G. G., Demiralp D. O., et al.
STEM CELLS , cilt.25, sa.2, ss.319-331, 2007 (SCI-Expanded) Creative Commons License identifier identifier identifier

Interleukin-10 gene transfer: Prevention of multiple organ injury in a murine cecal ligation and puncture model of sepsis

KABAY B., Kocaefe C., Baykal A., OEZDEN H., BAYCU C., ONER Z., et al.
WORLD JOURNAL OF SURGERY , cilt.31, sa.1, ss.105-115, 2007 (SCI-Expanded) identifier identifier identifier

The Genetic Basis of the Polycystic Ovary Syndrome: A Literature Review Including Discussion of PPAR-gamma

UNLUTURK U., Harmanci A., Kocaefe C., YILDIZ B.
PPAR RESEARCH , cilt.2007, 2007 (SCI-Expanded) Creative Commons License identifier identifier identifier

Liposome-mediated intraperitoneal interleukin 10 gene transfer increases survival in cecal ligation and puncture model of sepsis

Kabay B., Kocaefe Y. C., Baykal A., Ozguc M., SAYEK I.
SHOCK , cilt.26, sa.1, ss.37-40, 2006 (SCI-Expanded) Sürdürülebilir Kalkınma identifier identifier identifier

Androgen receptor immunostaining and androgen receptor messenger ribonucleic acid expression are increased in cremaster muscles associated with undescended testis

Tanyel F. C., Yuzbasioglu A., Kocaefe C., Orhan D., Ozguc M.
UROLOGY , cilt.67, sa.4, ss.855-858, 2006 (SCI-Expanded) identifier identifier identifier

Myogenic program induction in mature fat tissue (with MyoD expression)

Kocaefe Y. Ç., ISRAELI D., Ozguc M., DANOS O., GARCIA L.
EXPERIMENTAL CELL RESEARCH , cilt.308, sa.2, ss.300-308, 2005 (SCI-Expanded) identifier identifier identifier

Four-month-old infant with focal segmental glomerulosclerosis and mitochondrial DNA deletion

Unal S., Kalkanoglu H., Kocaefe C., Gueer S., Ozen S., TURANLI G., et al.
JOURNAL OF CHILD NEUROLOGY , cilt.20, sa.1, ss.83-84, 2005 (SCI-Expanded) identifier identifier identifier

Expression of matrix metalloproteinases in vasculitic neuropathy

Gurer G., Erdern S., Kocaefe C., Ozguc M., Tan E.
RHEUMATOLOGY INTERNATIONAL , cilt.24, sa.5, ss.255-259, 2004 (SCI-Expanded) identifier identifier identifier

Four novel thymidine phosphorylase gene mutations in mitochondrial neurogastrointestinal encephalomyopathy syndrome (MNGIE) patients

Kocaefe Y. Ç., Erdem S., Ozguc M., Tan E.
EUROPEAN JOURNAL OF HUMAN GENETICS , cilt.11, sa.1, ss.102-104, 2003 (SCI-Expanded) Creative Commons License identifier identifier identifier

Calcium-antagonistic activity of sumatriptan in the rat anococcygeus muscle

Emre-Aydingoz S., Kocaefe C., Tuncer M.
PHARMACOLOGY , cilt.64, sa.1, ss.43-48, 2002 (SCI-Expanded) identifier identifier identifier
Diğer Dergilerde Yayınlanan Makaleler

Role of echocardiography on early diagnosis of atrial remodelling and fibrosis in elite athletes

YILDIRIM A., TOKGÖZOĞLU S. L., Yıldırım M., Şener Y. Z., OKŞUL M., Akçay D., et al.
International Journal of Cardiovascular Imaging , cilt.39, sa.7, ss.1299-1306, 2023 (Scopus) identifier identifier
Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler

Serum Proteomic Signatures of Elite Athletes: Insights into Cardiovascular Health

KILIÇ H. B., ŞARDAN EKİZ M., ÇELİKBIÇAK Ö., TOKGÖZOĞLU S. L., KOCAEFE Y. Ç.
Uluslararası Proteomik Kongresi // 6. Ulusal Proteomik Kongresi, Kocaeli, Türkiye, 11 - 12 Ekim 2024

Serum Proteomic Signatures of Elite Athletes and Cancer Patients: Insights into Cardiovascular Health

KILIÇ H. B., ŞARDAN EKİZ M., ÇELİKBIÇAK Ö., TOKGÖZOĞLU S. L., KOCAEFE Y. Ç.
15th MaxQuant SummerSchool, Munich, Almanya, 9 - 13 Eylül 2024

RAB27A Gen Tedavisinin Olası Tümorijenik Etkilerinin İncelenmesi

EROL DUYAR Ö. D., ŞEKER M. E., PERVİN B., ÖZÇİMEN B., ŞENOCAK Ş., GİZER M., et al.
18. Tıbbi biyoloji ve genetik kongresi, 26 - 29 Ekim 2023, cilt.2, ss.15

In vitro Translasyon ile Ribozom İşlev Tayini

KILIÇ H. B., ÇETİNKAYA A., AKARSU A. N., KOCAEFE Y. Ç.
26. Ulusal Tıbbi Biyoloji ve Genetik Kongresi 2021, Türkiye, 28 - 31 Ekim 2021, cilt.1, ss.277-278

Sağlıkta ve Hastalıkta İskelet Kası Hücre Dışı Matriks’in Düzenlenmesinde TEAD Transkripsyon Faktörü Ailesinin Rolü ve Öneminin Multi-omik Yöntemlerle İncelenmesi

KILIÇ H. B., KOCAEFE Y. Ç.
26. Ulusal Tıbbi Biyoloji ve Genetik Kongresi 2021, Türkiye, 28 - 31 Ekim 2021, cilt.1, ss.271-272

Multiomic Meta-Analysis Identifies Common Players and Novel Regulators Modulating ECM In Skeletal Muscle

KILIÇ H. B., KOCAEFE Y. Ç.
Multiomics to Mechanisms: Challenges in Data Integration, Heidelberg, Almanya, 15 - 17 Eylül 2021

Repair of Griscelli Type 2 mesenchymal stem cells with a lentiviral vector carrying RAB27Aco

Erol Ö. D., Şeker M. E., Pervin B., Van Til N. P., Günel_Özcan A., Kocaefe Y. Ç., et al.
İstiniye Üniversitesi Kök Hücre ve Doku Mühendisliği Sempozyumu, İstanbul, Türkiye, 27 - 28 Şubat 2021

İskelet Kası Fibrozisinde Yeni Bir Düzenleyici; Adipocyte Enhancer Binding Protein 1 (AEBP1)/Aortic Carboxypeptidase- Like Protein (ACLP)

Sevim D., KILIÇ H. B., KOCAEFE Y. Ç.
Tıbbi Biyoloji ve Genetik Kongresi'19, Muğla, Türkiye, 27 Ekim 2019

İskelet Kası Dejenerasyonu ve Fibrozis Sürecinde, Yeni Hücre Dışı Matris Bileşenleri, Düzenleyicileri ve Çözünebilir Faktörleri Tanımlamaya Yönelik Bütüncül Bir Biyoinformatik Meta-Analiz

KILIÇ H. B., KOCAEFE Y. Ç.
Tıbbi Biyoloji ve Genetik Kongresi'19, Muğla, Türkiye, 27 Ekim 2019

A novel ARMS-PCR assay for screening MT-TL1 mutations causing mitochondrial cytopathies

KILIÇ H. B., Bekircan Kurt C. E., HALİLOĞLU V. G., ERDEM ÖZDAMAR S., TOPALOĞLU H. A., KOCAEFE Y. Ç.
FEBS OPEN BIO, 1 - 11 Haziran 2019, cilt.9, ss.202

Characterization of the Cellular Localization andExpression of AEBP1/ACLP Transcripts with anUnknown Function in Myoblasts

kılıç h. b., akçay d., sevim d., ÖZDEMİR SAKA C., KOCAEFE Y. Ç.
Molbiokon18 6th International Congress of theMolecular Biology Association of Turkey, 5 - 08 Eylül 2018

Characterization of the Cellular Localization and Expression of AEBP1/ACLP Transcripts with an Unknown Function in Myoblasts

KILIÇ H. B., Akçay D., ÖZDEMİR SAKA C., KOCAEFE Y. Ç.
Molbiyokon’18, İzmir, Türkiye, 05 Eylül 2018

Assessment of the Role of Tgf-beta and 3D Echocardiographic Evaluation in the Early Diagnosis of Atrial Remodelling in Elite Athletes

YILDIRIM A., TOKGÖZOĞLU S. L., YILDIRIM M., KOCAEFE Y. Ç., DÖNMEZ G., ŞENER Y. Z., et al.
ESC Congress 2018, MUNCHEN, Almanya, 25 - 29 Ağustos 2018

The Fibrogenic Activation Kinetics of Stromal Stem Cells in Three Different Skeletal Muscle Degeneration Models

ÖZDEMİR SAKA C., AKÇAY D., YÖYEN ERMİŞ D., ESENDAĞLI G., KOCAEFE Y. Ç.
43rd FEBS CONGRESS, 7 - 12 Temmuz 2018

Comparative Transcriptome Analysis of Distinct Stromal Cell Populations During Extracellular Matrix Remodeling in Skeletal Muscle

ÖZDEMİR SAKA C., AKÇAY D., YÖYEN ERMİŞ D., TAŞKIRAN Z. E., ESENDAĞLI G., KOCAEFE Y. Ç.
13th Meeting of the Mediterrranean Society of Myology, 27 - 29 Haziran 2018, cilt.37, ss.129-183

GENERATION OF INDUCED PLURIPOTENT STEM CELLS FROMMESENCHYMAL STEM CELLS OF OSTEOPETROSIS PATIENTSBY TWO DIFFERENT INTEGRATION-FREE METHODS UNDERFEEDER-FREE CONDITIONS

OKUR F. V., CEVHER İ., KILIÇ E., ÖZDEMİR SAKA C., KOCAEFE Y. Ç., ÇETİNKAYA F. D.
ISCT, 2 - 05 Mayıs 2018

Generation of targeted insertion in the Klf5 gene of mouse myoblasts (C2C12 cells) using CRISPR/Cas9 system

Akcay D., Kocaefe C.
41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Türkiye, 3 - 08 Eylül 2016, cilt.283, ss.129 identifier

AEBP1/ACLP is upregulated in differentiation, injury repair and fibrotic degeneration of skeletal muscle

Ozdemir C., Akpulat U., Onbasilar I., Kocaefe C.
41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Türkiye, 3 - 08 Eylül 2016, cilt.283, ss.287 identifier

Endocannabinoids And Their Receptors Are Located On Human Bone Marrow Niche Mesenchymal Stem And Hematopoietic Progenitor Cells

KÖSE S., AERTS KAYA F. S. F., AKAR İ., NEMUTLU E., KOCAEFE Y. Ç., ÇETİNKAYA F. D., et al.
ISSCR annual meeting 2015, 24 - 27 Haziran 2015

Mitochondrial myopathies: clinical, pathological and genetic features in a large series of patients

Celebi O., Kocaefe C., Ozdamar S. E., Ozguc M., Tan E.
13th Congress of the European-Federation-of-Neurological-Societies, Florence, İtalya, 12 - 15 Eylül 2009, cilt.16, ss.213 identifier

Osteopetrosisli hastalardan izole edilen mezenkimal kök hücrelerde adiposit farklılaşma defekti

ÇETİNKAYA F. D., Kılıç E., Sharafi P., Kazık M., AERTS KAYA F. S. F., ERDEMLİ E., et al.
1. Ulusal Hücresel Tedavi ve Rejeratif Tıp Kongresi 2009, Türkiye, 5 - 08 Mart 2009, ss.104

Mesenchymal stem cells from osteopetrosis patients display a defect in adipocyte differentiation

ÇETİNKAYA F. D., Kılıç E., Kazık M., Sharafi P., AERTS KAYA F. S. F., CAN A., et al.
ISCT 2008 1. regional meeting, 14 - 16 Eylül 2008, ss.130

Familial parkinsonism with apathy, depression and central hypoventilation (Perry's syndrome)

Elibol B., Kobayashi T., Atac F., Hattori N., Sahin G., Gurer G., et al.
5th International Conference on the Progress in Alzheimers and Parkinsons Disease/9th International Catecholamine Symposium, Kyoto, Japonya, 31 Mart - 05 Nisan 2001, cilt.51, ss.285-290 identifier
Metrikler

Yayın

58

Atıf (WoS)

765

H-İndeks (WoS)

12

Atıf (Scopus)

866

H-İndeks (Scopus)

13

Proje

28

Fikri Mülkiyet

2

Tez Danışmanlığı

7

Açık Erişim

8
BM Sürdürülebilir Kalkınma Amaçları