Publications & Works

Articles Published in Journals That Entered SCI, SSCI and AHCI Indexes

ACPA decreases non-small cell lung cancer line growth through Akt/PI3K and JNK pathways in vitro.

Boyacioglu O., BİLGİÇ E. , VARAN C. , BİLENSOY E. , NEMUTLU E. , GÜLMEZ SEVİM D. , et al.
Cell death & disease, vol.12, no.1, pp.56, 2021 (Journal Indexed in SCI Expanded) identifier identifier identifier

A Novel Amplification-Refractory Mutation System-PCR Strategy to Screen MT-TL1 Pathogenic Variants in Patient Repositories

Bulduk B. K. , Kilic H. B. , Bekircan-Kurt C. E. , Haliloglu G., ERDEM ÖZDAMAR S. , Topaloglu H., et al.
GENETIC TESTING AND MOLECULAR BIOMARKERS, vol.24, no.3, pp.165-170, 2020 (Journal Indexed in SCI) identifier identifier identifier

A single-tube multiplex qPCR assay for mitochondria DNA (mtDNA) copy number assessment

Kilic H. B. , Bulduk B. K. , KOCAEFE Y. Ç.
TURKISH JOURNAL OF BIOCHEMISTRY-TURK BIYOKIMYA DERGISI, vol.44, no.6, pp.769-777, 2019 (Journal Indexed in SCI) identifier identifier

Bone marrow derived mesenchymal stem cells ameliorate inflammatory response in an in vitro model of familial hemophagocytic lymphohistiocytosis 2

SEVİM H. , KOCAEFE Y. Ç. , ONUR M. A. , Uckan-Cetinkaya D. , GÜRPINAR Ö. A.
STEM CELL RESEARCH & THERAPY, vol.9, 2018 (Journal Indexed in SCI) identifier identifier identifier

GENERATION OF INDUCED PLURIPOTENT STEM CELLS FROM MESENCHYMAL STEM CELLS OF OSTEOPETROSIS PATIENTS BY TWO DIFFERENT INTEGRATION-FREE METHODS UNDER FEEDER-FREE CONDITIONS

Okur F. V. , Cevher I., Kilic E., Ozdemir C., Kocaefe C. , Cetinkaya D. U.
CYTOTHERAPY, vol.20, no.5, 2018 (Journal Indexed in SCI) identifier

Tenotomy immobilization as a model to investigate skeletal muscle fibrosis (with emphasis on Secreted frizzled-related protein 2)

AKPULAT U. , ONBAŞILAR İ. , KOCAEFE Y. Ç.
PHYSIOLOGICAL GENOMICS, vol.48, no.6, pp.397-408, 2016 (Journal Indexed in SCI) identifier identifier identifier

In Vitro Comparison of Adipokine Export Signals

Sharafi P., KOCAEFE Y. Ç.
PROTEIN AND PEPTIDE LETTERS, vol.23, no.6, pp.530-536, 2016 (Journal Indexed in SCI) identifier identifier

Effect of Zoledronic Acid on Rats' Tissue SDF-1 Expression

Arik Z., KILIÇKAP S. , AKPULAT U. , Nahit Sendur M. A. , KOCAEFE Y. Ç. , ERMAN M.
UHOD-ULUSLARARASI HEMATOLOJI-ONKOLOJI DERGISI, vol.26, no.4, pp.215-219, 2016 (Journal Indexed in SCI) identifier identifier

AEBP1/ACLP is upregulated in differentiation, injury repair and fibrotic degeneration of skeletal muscle

Özdemir C., AKPULAT U. , Akçay D., ONBAŞILAR İ. , KOCAEFE Y. Ç.
JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY, vol.36, no.6, pp.549-550, 2015 (Journal Indexed in SCI Expanded)

Generation of targeted insertion in the Klf5 gene of mouse myoblasts (C2C12 cells) using CRISPR/Cas9 system

Akçay D., AKPULAT U. , KOCAEFE Y. Ç.
JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY, vol.36, no.6, pp.547-548, 2015 (Journal Indexed in SCI Expanded) Creative Commons License

Periostin is temporally expressed as an extracellular matrix component in skeletal muscle regeneration and differentiation

OZDEMIR C. , Akpulat U. , SHARAFI P. , YILDIZ Y. , ONBAŞILAR İ. , Kocaefe C.
GENE, vol.553, no.2, pp.130-139, 2014 (Journal Indexed in SCI) identifier identifier identifier

Coronin 1A inhibits neurite outgrowth in PC12 cells

TERZI Y. K. , KOCAEFE Y. Ç. , AYTER S.
NEUROSCIENCE LETTERS, vol.582, pp.38-42, 2014 (Journal Indexed in SCI) identifier identifier identifier

Novel mutations of the MLC1 gene in Turkish patients

YÜZBAŞIOĞLU A. , TOPÇU M. , KOCAEFE Y. Ç. , ÖZGÜÇ M.
EUROPEAN JOURNAL OF MEDICAL GENETICS, vol.54, no.3, pp.281-283, 2011 (Journal Indexed in SCI) identifier identifier identifier

Reprogramming of Human Umbilical Cord Stromal Mesenchymal Stem Cells for Myogenic Differentiation and Muscle Repair

Kocaefe C. , Balci D., Hayta B. B. , Can A.
STEM CELL REVIEWS AND REPORTS, vol.6, no.4, pp.512-522, 2010 (Journal Indexed in SCI) identifier identifier identifier

Assessment of housekeeping genes for use in normalization of real time PCR in skeletal muscle with chronic degenerative changes

Yuzbasioglu A., Onbasilar I., Kocaefe C. , Ozguc M.
EXPERIMENTAL AND MOLECULAR PATHOLOGY, vol.88, no.2, pp.326-329, 2010 (Journal Indexed in SCI) identifier identifier identifier

Histone Deacetylase Inhibition Activity and Molecular Docking of (E )-Resveratrol: Its Therapeutic Potential in Spinal Muscular Atrophy

Dayangac-Erden D. , Bora G. , Ayhan P., Kocaefe C. , DALKARA S. , Yelekci K., et al.
CHEMICAL BIOLOGY & DRUG DESIGN, vol.73, no.3, pp.355-364, 2009 (Journal Indexed in SCI) identifier identifier identifier

Adipocyte differentiation defect in mesenchymal stromal cells of patients with malignant infantile osteopetrosis

Uckan D., KILIÇ E. , SHARAFI P., Kazik M. , Kaya F. A. , Erdemli E., et al.
CYTOTHERAPY, vol.11, no.4, pp.392-402, 2009 (Journal Indexed in SCI) identifier identifier identifier

Changes in the expression of selenoproteins in mesial temporal lobe epilepsy patients

YÜZBAŞIOĞLU A. , Karatas H. , GURSOY-OZDEMIR Y., Saygi S. , Akalan N. , Soylemezoglu F., et al.
Cellular and Molecular Neurobiology, vol.29, no.8, pp.1223-1231, 2009 (Journal Indexed in SCI Expanded) identifier identifier identifier

Functional structure of adipocytes differentiated from human umbilical cord stroma-derived stem cells

Karahuseyinoglu S. , Kocaefe C., Balci D., Erdemli E., Can A.
STEM CELLS, vol.26, no.3, pp.682-691, 2008 (Journal Indexed in SCI) identifier identifier identifier

Statin potentiates human platelet eNOS activity without enhancing eNOS mRNA and protein levels

Yemisci M. , AY H. , Kocaefe C., Qui J., Topalkara K., ÖZGÜÇ M. , et al.
CEREBROVASCULAR DISEASES, vol.26, no.2, pp.190-198, 2008 (Journal Indexed in SCI) identifier identifier identifier

Biology of stem cells in human umbilical cord stroma: In situ and in vitro surveys

Karahuseyinoglu S. , Cinar O., Kilic E., Kara F., Akay G. G. , Demiralp D. O. , et al.
STEM CELLS, vol.25, no.2, pp.319-331, 2007 (Journal Indexed in SCI) identifier identifier identifier

The Genetic Basis of the Polycystic Ovary Syndrome: A Literature Review Including Discussion of PPAR-gamma

UNLUTURK U. , Harmanci A. , Kocaefe C. , YILDIZ B.
PPAR RESEARCH, vol.2007, 2007 (Journal Indexed in SCI) identifier identifier identifier

Interleukin-10 gene transfer: Prevention of multiple organ injury in a murine cecal ligation and puncture model of sepsis

KABAY B. , Kocaefe C., Baykal A. , OEZDEN H., BAYCU C., ONER Z., et al.
WORLD JOURNAL OF SURGERY, vol.31, no.1, pp.105-115, 2007 (Journal Indexed in SCI) identifier identifier identifier

Liposome-mediated intraperitoneal interleukin 10 gene transfer increases survival in cecal ligation and puncture model of sepsis

Kabay B. , Kocaefe Y. C. , Baykal A. , Ozguc M. , SAYEK I.
SHOCK, vol.26, no.1, pp.37-40, 2006 (Journal Indexed in SCI) identifier identifier identifier

Androgen receptor immunostaining and androgen receptor messenger ribonucleic acid expression are increased in cremaster muscles associated with undescended testis

Tanyel F. C. , Yuzbasioglu A. , Kocaefe C. , Orhan D. , Ozguc M.
UROLOGY, vol.67, no.4, pp.855-858, 2006 (Journal Indexed in SCI) identifier identifier identifier

Myogenic program induction in mature fat tissue (with MyoD expression)

Kocaefe Y. Ç. , ISRAELI D., Ozguc M. , DANOS O., GARCIA L.
EXPERIMENTAL CELL RESEARCH, vol.308, no.2, pp.300-308, 2005 (Journal Indexed in SCI) identifier identifier identifier

Four-month-old infant with focal segmental glomerulosclerosis and mitochondrial DNA deletion

Unal S. , Kalkanoglu H., Kocaefe C. , Gueer S., Ozen S. , TURANLI G., et al.
JOURNAL OF CHILD NEUROLOGY, vol.20, no.1, pp.83-84, 2005 (Journal Indexed in SCI) identifier identifier identifier

Expression of matrix metalloproteinases in vasculitic neuropathy

Gurer G. , Erdern S., Kocaefe C., Ozguc M. , Tan E.
RHEUMATOLOGY INTERNATIONAL, vol.24, no.5, pp.255-259, 2004 (Journal Indexed in SCI) identifier identifier identifier

Four novel thymidine phosphorylase gene mutations in mitochondrial neurogastrointestinal encephalomyopathy syndrome (MNGIE) patients

Kocaefe Y. Ç. , Erdem S., Ozguc M. , Tan E.
EUROPEAN JOURNAL OF HUMAN GENETICS, vol.11, no.1, pp.102-104, 2003 (Journal Indexed in SCI) identifier identifier identifier

Calcium-antagonistic activity of sumatriptan in the rat anococcygeus muscle

Emre-Aydingoz S., Kocaefe C. , Tuncer M.
PHARMACOLOGY, vol.64, no.1, pp.43-48, 2002 (Journal Indexed in SCI) identifier identifier identifier

Refereed Congress / Symposium Publications in Proceedings

Characterization of the Cellular Localization andExpression of AEBP1/ACLP Transcripts with anUnknown Function in Myoblasts

kılıç h. b. , akçay d., sevim d., ÖZDEMİR SAKA C. , KOCAEFE Y. Ç.
Molbiokon18 6th International Congress of theMolecular Biology Association of Turkey, 5 - 08 September 2018

Assessment of the Role of Tgf-beta and 3D Echocardiographic Evaluation in the Early Diagnosis of Atrial Remodelling in Elite Athletes

YILDIRIM A. , TOKGÖZOĞLU S. L. , YILDIRIM M. , KOCAEFE Y. Ç. , DÖNMEZ G. , ŞENER Y. Z. , et al.
ESC Congress 2018, MUNCHEN, Germany, 25 - 29 August 2018

The Fibrogenic Activation Kinetics of Stromal Stem Cells in Three Different Skeletal Muscle Degeneration Models

ÖZDEMİR SAKA C. , AKÇAY D., YÖYEN ERMİŞ D., ESENDAĞLI G. , KOCAEFE Y. Ç.
43rd FEBS CONGRESS, 7 - 12 July 2018

Comparative Transcriptome Analysis of Distinct Stromal Cell Populations During Extracellular Matrix Remodeling in Skeletal Muscle

ÖZDEMİR SAKA C. , AKÇAY D., YÖYEN ERMİŞ D., TAŞKIRAN Z. E. , ESENDAĞLI G. , KOCAEFE Y. Ç.
13th Meeting of the Mediterrranean Society of Myology, 27 - 29 June 2018, vol.37, pp.129-183

GENERATION OF INDUCED PLURIPOTENT STEM CELLS FROMMESENCHYMAL STEM CELLS OF OSTEOPETROSIS PATIENTSBY TWO DIFFERENT INTEGRATION-FREE METHODS UNDERFEEDER-FREE CONDITIONS

OKUR F. V. , CEVHER İ., KILIÇ E., ÖZDEMİR SAKA C. , KOCAEFE Y. Ç. , ÇETİNKAYA F. D.
ISCT, 2 - 05 May 2018

AEBP1/ACLP is upregulated in differentiation, injury repair and fibrotic degeneration of skeletal muscle

Ozdemir C., Akpulat U. , Onbasilar I., Kocaefe C.
41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Turkey, 3 - 08 September 2016, vol.283, pp.287 identifier

Generation of targeted insertion in the Klf5 gene of mouse myoblasts (C2C12 cells) using CRISPR/Cas9 system

Akcay D., Kocaefe C.
41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Turkey, 3 - 08 September 2016, vol.283, pp.129 identifier

Mitochondrial myopathies: clinical, pathological and genetic features in a large series of patients

Celebi O. , Kocaefe C. , Ozdamar S. E. , Ozguc M., Tan E.
13th Congress of the European-Federation-of-Neurological-Societies, Florence, Italy, 12 - 15 September 2009, vol.16, pp.213 identifier

Familial parkinsonism with apathy, depression and central hypoventilation (Perry's syndrome)

Elibol B., Kobayashi T., Atac F., Hattori N., Sahin G., Gurer G. , et al.
5th International Conference on the Progress in Alzheimers and Parkinsons Disease/9th International Catecholamine Symposium, Kyoto, Japan, 31 March - 05 April 2001, vol.51, pp.285-290 identifier