Publications & Works

Publication Network
Articles 20
All (20)
SCI-E, SSCI, AHCI (18)
SCI-E, SSCI, AHCI, ESCI (19)
ESCI (1)
Scopus (19)

1. Senescence markers in peripheral blood mononuclear cells in pediatric drug-resistant epilepsy

GÜNBEY C., Muratoğlu B., ÖZDEMİR SAKA C., Çetinkaya D. U., YALNIZOĞLU D.
Brain and Development , vol.48, no.2, 2026 (SCI-Expanded, Scopus) identifier identifier

2. The crucial role of circadian synchronization in bone marrow adipose tissue mesenchymal stem cells: insights into pathogenesis in Fanconi anemia and acute myeloid leukemia

Muratoglu B., Ozdemir C., EYLEM C. C., REÇBER T., NEMUTLU E., Uckan-Cetinkaya D.
MOLECULAR BIOLOGY REPORTS , vol.53, no.1, 2025 (SCI-Expanded, Scopus) Sustainable Development identifier identifier

3. Evaluation of cartilage regeneration using a hybrid bilayer scaffold based on omentum: evidence of limited efficacy

Oral M., Dedeogullari E. S., Onen S., Ozdemir C., Muratoglu B., Caglar Z., et al.
JOURNAL OF ORTHOPAEDIC SURGERY AND RESEARCH , vol.20, no.1, 2025 (SCI-Expanded, Scopus) identifier identifier

4. Circadian rhythm and aryl hydrocarbon receptor crosstalk in bone marrow adipose tissue and implications in leukemia

Muratoglu B., ÖZDEMİR SAKA C., EYLEM C. C., REÇBER T., NEMUTLU E., YET İ., et al.
SCIENTIFIC REPORTS , no.1, 2025 (SCI-Expanded, Scopus) identifier identifier

5. Detailed characterization of bone marrow adipose tissue mesenchymal stem cells in healthy donor, Fanconi anemia, and acute myeloid leukemia

Muratoglu B., ÖZDEMİR SAKA C., EYLEM C. C., REÇBER T., NEMUTLU E., ALPDÜNDAR BULUT E., et al.
BONE , 2025 (SCI-Expanded, Scopus) identifier identifier

6. Simple Isolation of Human Bone Marrow Adipose Tissue-Derived Mesenchymal Stem/Stromal Cells

Tonyali G., Kilic E., Muratoglu B., ALPDÜNDAR BULUT E., ÖZDEMİR SAKA C., Uckan-cetinkaya D.
CURRENT PROTOCOLS , vol.5, no.1, 2025 (ESCI, Scopus) identifier identifier identifier

7. Upstream Process Protocol for MSCs Isolated from Different Human-Based Tissue Origins.

Kılıç P., Özdemir C., Coşar B., Savran B. N., Sarıkaya A., Sargon B., et al.
Methods in molecular biology (Clifton, N.J.) , 2024 (Scopus) identifier

8. Circadian-based metabolomics and lipidomics of bone marrow adipose tissue and implications in myeloid leukemia pathogenesis: the crucial role of cell synchronization

Muratoglu B., ÖZDEMİR SAKA C., Recber T., Eylem C. C., Nemutlu E., Uckan-Cetinkaya D.
FEBS OPEN BIO , pp.259, 2024 (SCI-Expanded) identifier

9. Multiparametric analysis of etoposide exposed mesenchymal stem cells and Fanconi anemia cells: implications in development of secondary myeloid malignancy

ÖZDEMİR SAKA C., Muratoğlu B., Özel B., ALPDÜNDAR BULUT E., Tonyalı G., ÜNAL S., et al.
Clinical and Experimental Medicine , vol.23, no.8, pp.4511-4524, 2023 (SCI-Expanded, Scopus) identifier identifier identifier

10. Disruption of the circadian transcriptome through bone marrow adipose tissue-specific aryl hydrocarbon receptor (AhR) signaling in Fanconi anemia and acute myeloid leukemia patients

Muratoglu B., ÖZDEMİR SAKA C., YET İ., Uckan-Cetinkaya D.
FEBS OPEN BIO , vol.13, pp.109, 2023 (SCI-Expanded, Scopus) identifier

11. Pro-fibrogenic and adipogenic aspects of chronic muscle degeneration are contributed by distinct stromal cell subpopulations

ÖZDEMİR SAKA C., Akçay D., Yöyen-Ermiş D., Taşkıran E. Z., Soylu-Kucharz R., ESENDAĞLI G., et al.
PloS one , vol.18, no.7, 2023 (SCI-Expanded, Scopus) Creative Commons License identifier identifier identifier

12. Identification of mesenchymal stem cell subpopulations from bone marrow adipose tissue of Fanconi anemia and acute myeloid leukemia patients

Ozdemir C., Muratoglu B., Tonyali G., Uckan-Cetinkaya D.
FEBS OPEN BIO , vol.12, pp.98, 2022 (SCI-Expanded, Scopus) identifier

13. Investigation of time-course and dose-dependent regulation of circadian clock genes with aryl hydrocarbon receptor-induced human bone marrow mesenchymal stem cells

Muratoglu B., Ozdemir C., Ozmen E. B., Uckan-Cetinkaya D.
FEBS OPEN BIO , vol.12, pp.298, 2022 (SCI-Expanded, Scopus) identifier

14. Alterations in Hematopoietic and Mesenchymal Stromal Cell Components of the Osteopetrotic Bone Marrow Niche

Zeytin I. C., Alkan B., ÖZDEMİR SAKA C., ÇETİNKAYA F. D., OKUR F. V.
STEM CELLS TRANSLATIONAL MEDICINE , vol.11, no.3, pp.310-321, 2022 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development identifier identifier identifier

15. The investigation of mechanisms of secondary leukemia through etoposide exposed mesenchymal stromal cells

Ozdemir C., Ozel B. N., Bulut E. A., Cetinkaya D. U.
FEBS OPEN BIO , vol.11, pp.424, 2021 (SCI-Expanded, Scopus) identifier

16. Osteopetrotic induced pluripotent stem cells derived from patients with different disease-associated mutations by non-integrating reprogramming methods

OKUR F. V., Cevher I., ÖZDEMİR SAKA C., Kocaefe C., ÇETİNKAYA F. D.
STEM CELL RESEARCH & THERAPY , vol.10, 2019 (SCI-Expanded, Scopus) identifier identifier identifier

17. The fibrogenic activation kinetics of stromal stem cells in three different skeletal muscle degeneration models

Ozdemir C., Akcay D., Ermis D. Y., ESENDAĞLI G., Kocaefe C.
FEBS OPEN BIO , vol.8, pp.93, 2018 (SCI-Expanded, Scopus) identifier

18. GENERATION OF INDUCED PLURIPOTENT STEM CELLS FROM MESENCHYMAL STEM CELLS OF OSTEOPETROSIS PATIENTS BY TWO DIFFERENT INTEGRATION-FREE METHODS UNDER FEEDER-FREE CONDITIONS

Okur F. V., Cevher I., Kilic E., Ozdemir C., Kocaefe C., Cetinkaya D. U.
CYTOTHERAPY , vol.20, no.5, 2018 (SCI-Expanded, Scopus) identifier

19. AEBP1/ACLP is upregulated in differentiation, injury repair and fibrotic degeneration of skeletal muscle

Özdemir C., AKPULAT U., Akçay D., ONBAŞILAR İ., KOCAEFE Y. Ç.
JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY , vol.36, no.6, pp.549-550, 2015 (SCI-Expanded, Scopus)

20. Periostin is temporally expressed as an extracellular matrix component in skeletal muscle regeneration and differentiation

OZDEMIR C., Akpulat U., SHARAFI P., YILDIZ Y., ONBAŞILAR İ., Kocaefe C.
GENE , vol.553, no.2, pp.130-139, 2014 (SCI-Expanded, Scopus) identifier identifier identifier
Papers Presented at Peer-Reviewed Scientific Conferences 10

1. Modeling Hematopoietic Niche in Osteopetrosis Using Patient-Derived Induced Pluripotent Stem Cells

cevher i., Alkan B., ÖZDEMİR SAKA C., ÇETİNKAYA F. D., OKUR F. V.
ESGCT, Barcelona, Spain, 22 - 25 October 2019, (Summary Text)

2. Modeling haematopoietic niche in osteopetrosis using patient-derived induced pluripotent stem cells

Cevher I., Alkan B., Ozdemir C., Cetinkaya D. U., Okur F. V.
ESGCT 27th Annual Congress in collaboration with SETGyc Meeting, Barcelona, Spain, 22 - 25 October 2019, vol.30, (Summary Text) identifier

3. Hematopoietic differentiation potential of induced pluripotent stem cells derived from osteopetrosis patients’xx peripheral blood mononuclear cells

Cevher I., Alkan B., Ozdemir C., CETINKAYA D., OKUR F. V.
ISSCR International Symposia, Amsterdam, Netherlands, 20 - 22 February 2019, (Summary Text)

4. Characterization of the Cellular Localization and Expression of AEBP1/ACLP Transcripts with an Unknown Function in Myoblasts

KILIÇ H. B., Akçay D., ÖZDEMİR SAKA C., KOCAEFE Y. Ç.
Molbiyokon’18, İzmir, Turkey, 05 September 2018, (Summary Text)

5. Characterization of the Cellular Localization andExpression of AEBP1/ACLP Transcripts with anUnknown Function in Myoblasts

kılıç H. B., akçay d., sevim d., ÖZDEMİR SAKA C., KOCAEFE Y. Ç.
Molbiokon18 6th International Congress of theMolecular Biology Association of Turkey, 5 - 08 September 2018, (Full Text)

6. The Fibrogenic Activation Kinetics of Stromal Stem Cells in Three Different Skeletal Muscle Degeneration Models

ÖZDEMİR SAKA C., AKÇAY D., YÖYEN ERMİŞ D., ESENDAĞLI G., KOCAEFE Y. Ç.
43rd FEBS CONGRESS, 7 - 12 July 2018, (Full Text)

7. Comparative Transcriptome Analysis of Distinct Stromal Cell Populations During Extracellular Matrix Remodeling in Skeletal Muscle

ÖZDEMİR SAKA C., AKÇAY D., YÖYEN ERMİŞ D., TAŞKIRAN Z. E., ESENDAĞLI G., KOCAEFE Y. Ç.
13th Meeting of the Mediterrranean Society of Myology, 27 - 29 June 2018, vol.37, pp.129-183, (Full Text)

8. GENERATION OF INDUCED PLURIPOTENT STEM CELLS FROMMESENCHYMAL STEM CELLS OF OSTEOPETROSIS PATIENTSBY TWO DIFFERENT INTEGRATION-FREE METHODS UNDERFEEDER-FREE CONDITIONS

OKUR F. V., CEVHER İ., KILIÇ E., ÖZDEMİR SAKA C., KOCAEFE Y. Ç., ÇETİNKAYA F. D.
ISCT, 2 - 05 May 2018, (Full Text)

9. Klf5 acts as a differentiation switch from proliferation to fusion in myoblasts

Akpulat U., YILDIZ Y., Ozdemir-Saka C., Akcay D., Kocaefe C.
41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Turkey, 3 - 08 September 2016, vol.283, pp.114, (Summary Text) identifier

10. AEBP1/ACLP is upregulated in differentiation, injury repair and fibrotic degeneration of skeletal muscle

Ozdemir C., Akpulat U., Onbasilar I., Kocaefe C.
41st FEBS Congress on Molecular and Systems Biology for a Better Life, Kusadasi, Turkey, 3 - 08 September 2016, vol.283, pp.287, (Summary Text) identifier
Metrics

Publication

31

Publication (WoS)

22

Publication (Scopus)

20

Citation (WoS)

52

H-Index (WoS)

4

Citation (Scopus)

52

H-Index (Scopus)

4

Citation (Scholar)

85

H-Index (Scholar)

5

Project

18

Open Access

3
UN Sustainable Development Goals